Allele Frequencies in World Populations

HLA > Haplotype Frequency Search

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A B C DRB1 DPA1 DPB1 DQA1 DQB1

Population:  Country:  Source of dataset : 
Region:  Ethnic Origin:     Type of study :  Sort by: 
Sample Size:      Sample Year:     Loci Tested: 
Displaying 1 to 44 (from 44) records   Pages: 1 of 1  

Line Haplotype Population Frequency (%) Sample Size Distribution¹
 1  B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 1.3986143
 2  B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 1.0700234
 3  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02  Mexico Tixcacaltuyub Maya 0.746367
 4  A*24:02-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 5  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.4587218
 6  A*68:01:02-B*39:08-C*07:02:01-DRB1*08:02:01-DQB1*04:02:01  Costa Rica Central Valley Mestizo (G) 0.4525221
 7  B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4300234
 8  B*39:02-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4300234
 9  A*24:02-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4274234
 10  A*68:01-B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo pop 2 0.4274234
 11  A*01:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 12  A*02:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 13  A*02:06-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 14  A*24:02-B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 15  A*68:01-B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 16  A*68:03-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 17  B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 18  B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  Mexico Mexico City Mestizo population 0.3497143
 19  A*02:22-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.27341,463
 20  A*02:06-B*39:08-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 21  A*68:05-B*39:05-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02  Mexico Chiapas Lacandon Mayans 0.2294218
 22  A*02:06-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  USA NMDP Hawaiian or other Pacific Islander 0.211111,499
 23  A*68:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.15691,463
 24  A*02:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.10781,463
 25  A*24:02-B*39:06-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.09501,999
 26  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*02:01  Japan pop 17 0.07003,078
 27  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.07003,078
 28  A*31:01-B*39:03-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.04701,999
 29  A*24:03-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03801,463
 30  A*02:01-B*39:11-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03651,463
 31  A*24:14-B*39:08-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03421,463
 32  A*03:01-B*39:05-C*07:02-DRB1*08:02-DQB1*04:02  Colombia Bogotá Cord Blood 0.03271,463
 33  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*03:01  Japan pop 17 0.03003,078
 34  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*06:01  Japan pop 17 0.03003,078
 35  A*02:28-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 36  A*26:01-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:01-DPB1*05:01  Japan pop 17 0.03003,078
 37  A*31:01-B*39:01-C*07:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:02-DPB1*05:01  Japan pop 17 0.03003,078
 38  A*26:01:01-B*39:01:01-C*07:02:01-DRB1*08:02:01-DQB1*04:02:01  China Zhejiang Han 0.02881,734
 39  A*02:01-B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.02301,999
 40  A*02:01-B*39:13-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.01201,999
 41  A*02:06-B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.01201,999
 42  A*02:11-B*39:13-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.01201,999
 43  A*25:01-B*39:01-C*07:02-DRB1*08:02-DQB1*04:02  USA Hispanic pop 2 0.01201,999
 44  A*32:01:01-B*39:01:01-C*07:02:01-DRB1*08:02:01-DQB1*04:02:01  Poland BMR 0.006423,595

Notes:

* Haplotype Frequencies: Total number of copies of the haplotype in the population sample (Haplotypes / 2n) shown in percentages (%).
   Important: This field has been expanded to two decimals to better represent frequencies of large datasets (e.g. where sample size > 1000 individuals)
¹ Distribution - Shows the geographic distribution in overlaid maps of the complete haplotype (left icon) or the input alleles if low level resolution was entered (right icon).




   

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.

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